论文列表

--- gaoyi@gatech.edu

English

期刊论文和书籍章节

  1. 易东生, 孙宛怡, 宋宏萍, 赵雪莲, 胡尚英, 顾翔, 高毅*, 赵方辉*, "人工智能辅助自动乳腺超声与手持超声在乳腺癌筛查中的效能比较", 中华医学杂志 2025 年 8 月 26 日第 105 卷第 32 期
  2. Zengan Huang, Jun Huang, Xiao Li, Lei Wang, Haiyue Yu, Yunan Zhang, Hongping Song*, Yi Gao*, "Optimal lossy compression scheme of 3D volumetric ultrasound images for remote breast cancer screening", Journal of Imaging Informatics in Medicine, 2026, DOI: 10.1007/s10278-025-01735-9
  3. Zengan Huang, Qinzhu Yang, Yi Gao*, "A multi-task learning network with boundary regression for automatic ultrasound image segmentation", Biomedical Signal Processing and Control, vol 113 2026, DOI: 10.1016/j.bspc.2025.108828
  4. Tian Mou, Yuejie Lin, Fanghui Fan, Jian Huang, Taotao Sun, En-Tao Liu, Yi Gao*, "A Model-based Harmonization Strategy of Standard Uptake Values for Paired PET Studies", Phenomics, In press
  5. Kun Huang, Jin Wang, Qinzhu Yang, Gengbiao Zhang, Hongyi Zheng, Yi Gao*, Wenbin Zheng*, "Diagnosing acute bilirubin encephalopathy in neonates using MRI-based deep learning model", BMC Pediatrics 25:828 2025. DOI:10.1186/s12887-025-06150-1
  6. Yi Gao, Jianwen Liang, Mu Tian, Wenjiang Deng, Lei Wang, Siyuan Tao, Tian Mou*, "Histology image analysis of 13 healthy tissues reveals molecular-histological correlations", Scientific Report, 15, 26812 (2025). DOI: 10.1038/s41598-025-11853-7
  7. Jiahong Liang, Yi Gao*, "Lightweight Memory-Driven Self-Attention for Hyperspectral Image Classification with CNN-Transformer Cross-Feature Fusion", NeuroComputing, 651, 2025, DOI: 10.1016/j.neucom.2025.130998.
  8. Han Zhou, Haofan Huang, Kaibin Huang, XiaoYan Chen, Yao Fu, ZiJie Fu, Xiaolei Zhang, Renhua Wu, Yi Gao*, Yan Lin*, "3.0 T multi-parametric MRI combined with clinical features improve malignancy prediction of BI-RADS 4 lesions and preoperative prediction of Nottingham Prognostic Index", European Journal of Radiology Open, 2025, DOI: j.ejro.2025.100665
  9. Mu Tian, Qinzhu Yang, Yi Gao*, "AttenScribble: Attention-Enhanced Scribble Supervision for Medical Image Segmentation", Journal of Visual Communication and Image Representation, 2025, Published online, DOI: 10.1016/j.jvcir.2025.104476
  10. Weizhen He, Haoran Zhu, Xionghui Rao, Qingzhu Yang, Huixing Luo, Xiaobin Wu*, Yi Gao*, "Biophysical Modeling and Artificial Intelligence for Quantitative Assessment of Anastomotic Blood Supply in Laparoscopic Low Anterior Rectal Resection", Surgical Endoscopy, 2025, DOI: 10.1007/s00464-025-11693-6
  11. Qinqin Huang, Shenao Wu, Zhenkai Ou, Yi Gao*, "Computational pathology: A comprehensive review of recent developments in digital and intelligent pathology", Intelligent Oncology, 2025, DOI: 10.1016/j.intonc.2025.03.004
  12. Ji Dai, Huiyu Xu, Tao Chen, Tao Huang, Weiqi Liang, Rui Zhang, Gengxin Xu, Zhiting Zhang, Le Xue, Yi Gao, Mingyue Zheng, Guoshuang Feng, Zhe Zhang, Jinle Tang, Jian Zhan, Yaoqi Zhou, Ye Li, Yixue Li, Mei Tian, "Artificial Intelligence for Medicine 2025: Navigating the Endless Frontier", The Innovation Medicine, 2025, 100120. DOI: 10.59717/j.xinn-med.2025.100120.
  13. Qinzhu Yang, Kun Huang, Gongwei Zhang, Xianjun Li, Yi Gao*, Cailei Zhao*, "Relationship between the volume of ventricles, brain parenchyma and neurocognition in children after Hydrocephalus treatment", Childs Nervous System 2025 41:48; DOI: 10.1007/s00381-024-06674-4
  14. Zengan Huang, Qinzhu Yang, Mu Tian, Yi Gao*, "Synthesizing Images with Annotations for Medical Image Segmentation Using Diffusion Probabilistic Model", International Journal of Imaging Systems and Technology. 2025; 35:1; DOI: 10.1002/ima.70007
  15. Yi Gao*, Xiaohui Chen, Qinzhu Yang, Andras Lasso, Ivan Kolesov, Steve Pieper, Ron Kikinis, Allen Tannenbaum, Liangjia Zhu*, "An effective and open source interactive 3D medical image segmentation solution", Scientific Reports. 2024; 14:29878; DOI: 10.1038/s41598-024-80206-7 本算法被3D Slicer软件采纳作为交互式分割核心模块。
  16. Zengan Huang, Xin Zhang, Yan Ju, Ge Zhang, Wanying Chang, Hongping Song*, Yi Gao*, "Explainable breast cancer molecular expression prediction using multi-task deep-learning based on 3D whole breast ultrasound", Insights into Imaging. 2024; 15:227; DOI: 10.1186/s13244-024-01810-9
  17. Zengan Huang, Shan Gao, Xiaxia Yu, Liangjia Zhu, Yi Gao*, "Enhanced Deformation Vector Field Generation With Diffusion Models and Mamba Based Network for Registration Performance Enhancement", International Journal of Imaging Systems and Technology. 2024; 34:5; DOI: 10.1002/ima.23171
  18. Xiaozhi Dang, Yi Gao, Yan Ju, Xiaojie Yuan, Huan Lin, Yi Ren, Yao Xiao, Rui Shu, Xiang Gu, Woo Kyung Moon, Hongping Song*, "Automated Breast Ultrasound With Remote Reading for Primary Breast Cancer Screening: A Prospective Study Involving 46 Community Health Centers in China", American Journal of Roentgenology. 2024; DOI: 10.2214/AJR.24.31830
  19. Haofan Huang, Qi Zhao, Huanhao Li, Yuandong Zheng, Zhipeng Yu, Tianting Zhong, Shengfu Cheng, Chi Man Woo, Yi Gao, Honglin Liu, Yuanjin Zheng, Jie Tian*, Puxiang Lai*, "DeepSLM: Speckle‐Licensed Modulation via Deep Adversarial Learning for Authorized Optical Encryption and Decryption", Advanced Intelligent Systems. 2024; DOI: 10.1002/aisy.202400150
  20. Qinzhu Yang, Guojing Chen, Zhi Yang, Tammy Riklin Raviv, Yi Gao*, "Fine hippocampal morphology analysis with a multi-dataset cross-sectional study on 2911 subjects", NeuroImage: Clinical. 2024; 43, DOI: 10.1016/j.nicl.2024.103620
  21. 党晓智, 高毅, 顾翔, 巨艳, 易东生, 林欢, 任毅, 袁筱婕, 宋宏萍, "基于自动乳腺超声远程阅片模式的乳腺癌筛查临床研究", 中华肿瘤杂志. 2024, 46(11); DOI: 10.3760/cma.j.cn112152-20240204-00064
  22. Weizhen He, Bingshuai Zhao, Yongjin Zhou, Ruodai Wu, Guangyao Wu, Ye Li, Minhua Lu, Liangjia Zhu, Yi Gao*, "Freehand 3D ultrasound imaging based on probe-mounted vision and IMU system", Ultrasound in Medicine & Biology, 2024; 50:8; DOI: 10.1016/j.ultrasmedbio.2024.03.021
  23. Tingting Deng, Jianwen Liang, Cuiju Yan, Mengqian Ni, Huiling Xiang, Chunyan Li, Jinjing Ou, Qingguang Lin, Lixian Liu, Guoxue Tang, Rongzhen Luo, Xin An, Yi Gao*, Xi Lin*, "Development and validation of ultrasound-based radiomics model to predict germline BRCA mutations in patients with breast cancer", Cancer Imaging, 2024; 24:31 DOI:10.1186/s40644-024-00676-w
  24. Qinzhu Yang, Haofan Huang, Guizhi Zhang, Nuoging Weng, Zhenkai Ou, Meili Sun, Huixing Luo, Xuhui Zhou*, Yi Gao*, Xiaobin Wu*, "Contrast-enhanced CT-based radiomic analysis for determining the response to anti-programmed death-1 therapy in esophageal squamous cell carcinoma patients: A pilot study", Thoracic Cancer, 2023:9. DOI: 10.1111/1759-7714.15117
  25. Yang Xia*, Jie Zhao, Yiya He, Xue Yang, Panwen Tian, Kun Huang, Jing Zhao, Jiaqi Zhou, Qiyuan Wang, Mailin Chen, Wen Li*, Yi Gao*, Yongchang Zhang*, "Assessing treatment outcomes of chemoimmunotherapy in extensive-stage small cell lung cancer: An integrated clinical and radiomics approach", Journal for ImmunoTherapy of Cancer, 2023;11:e007492. DOI: 10.1136/jitc-2023-007492
  26. Qinzhu Yang, Shuxiu Cai, Guojing Chen, Xiaxia Yu, Renee F. Cattell, Chuan Huang, Nu Zhang, Yi Gao*, "Fine Scale Hippocampus Morphology Variation Cross 552 Healthy Subjects from Age 20-80", Frontiers Neuroscience, 2023; 31(17), p1162096. DOI: 10.3389/fnins.2023.1162096
  27. 王路, 罗泽斌, 倪健慧, 李岩, 陈李清, 关舒文, 张楠楠, 王鑫, 蔡蓉, 高毅*, 张庆丰*, "基于 U-Net网络的儿童腺样体及鼻咽气道图像分割", 临床耳鼻咽喉头颈外科杂志, 2023, 37(8):pp632-641. DOI: 10.13201/j.issn.2096-7993.2023.08.006
  28. Youchao Dai, Chuanzhi Zhu, Wei Xiao, Kaisong Huang, Xin Wang, Chenyan Shi, Dachuan Lin, Huihua Zhang, Xiaoqian Liu, Bin Peng, Yi Gao, Cui Hua Liu, Baoxue Ge, Stefan H. E. Kaufmann, Carl G. Feng, Xinchun Chen, Yi Cai, "Mycobacterium tuberculosis hijacks host TRIM21-and NCOA4-dependent ferritinophagy to enhance intracellular growth", Journal of Clinical Investigation, 2023, 133(8): e159941. 2023. DOI:10.1172/JCI159941
  29. Wei Zhou, Guofeng Chen, Dan Gong, Yi Gao, Li Yu, "Risk factors for post-transplant relapse and survival in younger adult patients with t(8;21)(q22;q22) acute myeloid leukemia undergoing allogeneic hematopoietic stem cell transplantation: A multicenter retrospective study", Frontiers in Oncology: Hematologic Malignancies, 2023. DOI:10.3389/fonc.2023.1138853
  30. Tian Mou, Jianwen Liang, Trung Nghia Vu, Mu Tian*, Yi Gao*, "A comprehensive landscape of imaging feature associated RNA expression profiles in breast", Sensors 23(3), 1432, 2023. DOI: 10.3390/s23031432
  31. Xue Li, Jun Huang, Cuiting Wang, Xiaxia Yu, Tianhao Zhao, Chuan Huang, Yi Gao*, "Expectation-Maximization algorithm leads to domain adaptation for a perineural invasion and nerve extraction task in whole slide digital pathology images", Medical & Biological Engineering & Computing 61(2):457-473. 2023. DOI: 10.1007/s11517-022-02711-z
  32. Jundong Shao, Jing Zhang, Nicolo Antonio Villasis, Xingxing Li, Guojing Chen, Guojun Chen, Jicheng Yu, Yuqi Zhang, Jinaiana Wang, Yi Gao, Jing Lin, Peng Huang, Zhen Gu, "Printable personalized drug delivery patch for the topical therapy of skin diseases", Matter, 6(1):158-174. 2023. DOI: 10.1016/j.matt.2022.09.018
  33. Kaibin Huang, Shengyun Huang, Guojing Chen, Xue Li, Shawn Li, Ying Liang*, Yi Gao*, "An end-to-end multi-task system of automatic lesion detection and anatomical localization in whole-body bone scintigraphy by deep learning", Bioinformatics 39(1), Jan 2023, DOI: 10.1093/bioinformatics/btac753
  34. Jia Ying, Renee Cattell, Tianyun Zhao, Lan Lei, Zhao Jiang, Shahid M. Hussain, Yi Gao, H.-H. Sherry Chow, Alison T. Stopeck, Patricia A. Thompson, Chuan Huang, "Two fully automated data-driven 3D whole-breast segmentation strategies in MRI for MR-based breast density using image registration and U-Net with a focus on reproducibility", Visual Computing for Industry, Biomedicine, and Art, 5(5), Oct 2022.
  35. Haofan Huang, Xiaxia Yu, Mu Tian, Weizhen He, Shawn Xiang Li, Zhengrong Liang*, Yi Gao*, "Open-source algorithm and software for computed tomography-based virtual pancreatoscopy and other applications", Visual Computing for Industry, Biomedicine, and Art 5(20), Oct 2022. DOI: 10.1186/s42492-022-00116-1
  36. 唐泽慧, 高喜璨, 高毅, 顾翔, 宋宏萍, "中国女性对定期乳腺检查认知的调查分析", 空军军医大学学报, 2022. https://kns.cnki.net/kcms/detail/61.1526.r.20220829.1840.005.html
  37. Sai Zhang, Liangjia Zhu, Yi Gao*, "An efficient deep equilibrium model for medical image segmentation", Computers in Biology and Medicine,148: 105831, Sept 2022, DOI: 10.1016/j.compbiomed.105831
  38. Xiaozhi Dang, Xin Zhang, Yi Gao*, Hongping Song*, "Assessment of Neoadjuvant Treatment Response Using Automated Breast Ultrasound in Breast Cancer." J Breast Cancer. 2022;25:e32. Aug 2022. DOI: 10.4048/jbc.2022.25.e32
  39. Junxiao Zheng, Qinzhu Yang, Nikos Makris, Kaibin Huang, Jianwen Liang, Chenfei Ye, XiaXia Yu, Mu Tian, Ting Ma, Tian Mou, Wenlong Guo, Ron Kikinis, Yi Gao*, "Three-dimensional digital reconstruction of the cerebellar cortex: Lobule thickness, surface area measurements and layer architecture", Cerebellum 22(2), 249–260, 2022. DOI: 10.1007/s12311-022-01390-8. 审稿人评价: “总体而言，这是一项非凡的技术成就，将有助于增进我们对小脑解剖学的理解。”(“Overall it's an exceptional technical achievement and will help to advance our understanding of cerebellar anatomy.”)
  40. Wenjin Yu, Yangyang Liu, Yunsong Zhao, Haofan Huang, Jiahao Liu, Xiaofeng Yao, Jingwen Li, Zhen Xie, Luyue Jiang, Heping Wu, Xinhao Cao, Jiaming Zhou, Yuting Guo, Gaoyang Li, Matthew Xinhu Ren, Yi Quan, Tingmin Mu, Guillermo Ayuso Izquierdo, Guoxun Zhang, Runze Zhao, Di Zhao, Jiangyun Yan, Haijun Zhang, Junchao Lv, Qian Yao, Yan Duan, Huimin Zhou, Tingting Liu, Ying He, Ting Bian, Wen Dai, Jiahui Huai, Xiyuan Wang, Qian He, Yi Gao*, Wei Ren*, Gang Niu*, Gang Zhao*, "Deep Learning-Based Classification of Cancer Cell in Leptomeningeal Metastasis on Cytomorphologic Features of Cerebrospinal Fluid." Frontiers in Oncology 12, DOI: 10.3389/fonc.2022.821594.
  41. Yi Gao, Cheng Chang, Xiaxia Yu, Pengjin Pang, Nian Xiong, Chuan Huang, "A VR‑based volumetric medical image segmentation and visualization system with natural human interaction." Virtual Reality, 26, 415–424, 2022. DOI: 10.1007/s10055-021-00577-4.
  42. Xiaxia Yu, Bingshuai Zhao, Haofan Huang, Mu Tian, Sai Zhang, Hongping Song, Zengshan Li, Kun Huang, Yi Gao*, "An open source platform for computational histopathology". IEEE Access, 9: 73651-73661, 2021. DOI: 10.1109/ACCESS.2021.3080429 slicerscope.github.io
  43. Tong Sun, Penghui Hao, Chien Chin, Dingqian Deng, Tiemei Chen, Yi Chen, Mian Chen, Haoming Lin, Minhua Lu, Yi Gao, Siping Chen, Chunqi Chang, Xin Chen, "Rapid rotational magneto-acousto-electrical tomography with filtered back-projection algorithm based on plane waves". Physics in Medicine and Biology, 66(9), 2021 Apr 21. DOI: 10.1088/1361-6560/abef43.
  44. Jun Huang, Xue Li, Jing Wang, Xiaxia Yu, Liangjia Zhu, Ying Zhan, Yi Gao*, Chuan Huang, "Cross-Dataset Multiple Organ Segmentation From CT Imagery Using FBP-Derived Domain Adaptation". IEEE Access, 9: 25025-25035, 2021. DOI: 10.1109/ACCESS.2021.3055803
  45. Mu Tian, Jinchan He, Xiaxia Yu, Chudong Cai, Yi Gao*, "MCMC guided CNN training and segmentation for pancreas extraction". IEEE Access, 9: 90539-90554, 2021. DOI: 10.1109/ACCESS.2021.3070391
  46. Haofan Huang, Yong Liu, Ming Wu, Yi Gao*, Xiaxia Yu*, "Development and validation of a risk stratification model for predicting the mortality of acute kidney injury in critical care patients". Annals of Translational Medicine, 9(4):323. 2021 Feb. DOI: 10.21037/atm-20-5723
  47. Jingwen Li, Xiaxia Yu, Shaoping Hu, Zhicheng Lin, Nian Xiong*, Yi Gao*, "COVID-19 targets the right lung." Critical Care 24, Article number: 339. 2020. DOI: 10.1186/s13054-020-03033-y
  48. Karl D. Spuhler, John Gardus, Yi Gao, Christine DeLorenzo, Ramin Parsey, Chuan Huang, "Synthesis of patient-specific transmission image for PET attenuation correction for PET/MR imaging of the brain using a convolutional neural network." Journal of Nuclear Medicine 60(4): 555-560, 2019.
  49. Chunling Liu, Jie Ding, Karl Spuhler, Yi Gao, Mario Serrano Sosa, Meghan Moriarty, Shahid Hussain, Xiang He, Changhong Liang, Chuan Huang, "Preoperative prediction of sentinel lymph node metastasis in breast cancer by radiomic signatures from dynamic contrast‐enhanced MRI." Journal of Magnetic Resonance Imaging 49 (1):131-140, 2019. (2019-2020 most cited original research paper of J-MRI)
  50. Jie Ding, Alison T. Stopeck, Yi Gao, Marilyn T. Marron, Betsy C. Wertheim, Maria I. Altbach, Jean-Philippe Galons, Denise J. Roe, Fang Wang, Gertraud Maskarinec, Cynthia A. Thomson, Patricia A. Thompson, Chuan Huang, "Reproducible automated breast density measure with no ionizing radiation using fat-water decomposition MRI." Journal of Magnetic Resonance Imaging 48(4):971-981, 2018.
  51. Cheng Chang, Chuan Huang, Naiyun Zhou, Shawn Xiang Li, Lawrence Ver Hoef, Yi Gao*, "The bumps under the hippocampus." Human Brain Mapping 39 (1): 472–490. 2018.
  52. Vadim Ratner, Yi Gao, Hedok Lee, Rena Elkin, Maiken Nedergaard, Helene Benveniste, Allen Tannenbaum, "Cerebrospinal and interstitial fluid transport via the glymphatic pathway modeled by optimal mass transport." NeuroImage 152: 530–537. 2017. Cover highlight
  53. Joel Saltz, Ashish Sharma, Ganesh Iyer, Erich Bremer, Feiqiao Wang, Alina Jasniewski, Tammy DiPrima, Jonas S. Almeida, Yi Gao, Tianhao Zhao, Mary Saltz, Tahsin Kurc, "A containerized software system for generation, management, and exploration of features from whole slide tissue images." Cancer Research 77 (21): e79–e82. 2017.
  54. George Teodoro, Tahsin M. Kur, Luis F. R. Taveira, Alba C. M. A. Melo, Yi Gao, Jun Kong, Joel Saltz, "Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines." Bioinformatics 33 (7): 1064–1072. 2017
  55. Si Wen, Tahsin M. Kurc, Yi Gao, Tianhao Zhao, Joel Saltz, Wei Zhu, "A methodology for texture feature-based quality assessment in nucleus segmentation of histopathology image." Journal of Pathology Informatics 8 (38). 2017.
  56. Yi Gao, Sylvain Bouix, "Statistical shape analysis using 3D Poisson equation—a quantitatively validated approach." Medical Image Analysis 30: 72–84. 2016.
  57. Ryan Eckbo, Yi Gao, Tracey L. Petryshen, Gabriëlla A.M. Blokland, Larry J. Seidman, Jun Konishi, Jill M. Goldstein, Robert W. McCarley, Martha E. Shenton, Sylvain Bouix, "A new MRI masking technique based on multi-atlas brain segmentation in controls and schizophrenia: A Rapid and Viable Alternative to Manual Masking." Journal of Neuroimaging 26 (1): 28–36. 2016.
  58. Yi Hong, Yi Gao, Marc Niethammer, Sylvain Bouix, "Shape analysis based on depth-ordering." Medical Image Analysis 25 (1): 2–10. 2015.
  59. Asim Bag, Hyunki Kim, Yi Gao, Mark Bolding, Paula P. Warren, Hassan M. Fathallah-Shaykh, Demet Gurler, James M. Markert, John Fiveash, Timothy M. Beasley, Ayaz Khawaja, Gregory K. Friedman, Philip R. Chapman, Louis B. Nabors, Xiaosi Han, "Prolonged treatment with Bevacizumab is associated with brain atrophy: a pilot study in patients with high-grade gliomas." Journal of Neuro-Oncology 122 (3): 585–593. 2015.
  60. Yi Gao, Wei Chen, Baoyu Liu, Allen Tannenbaum, Cheng Zhu, "T-Cell shape variation with intra-cellular Ca2+ concentration: a joint image and shape study." Computer Assisted Surgery, New Developments, Applications And Potential Hazards. 2015.
  61. Yi Gao, Liangjia Zhu, Josh Cates, Rob S. MacLeod, Sylvain Bouix, Allen Tannenbaum, "A Kalman filtering perspective for multi-atlas segmentation." SIAM Journal on Imaging Sciences 8 (2): 1007–1029. 2015.
  62. Silas Leavesley, Arie Nakhmani, Yi Gao, Thomas Rich, "Automated image analysis of FRET signals for subcellular cAMP quantification." cAMP Signaling. Methods in Molecular Biology v1294:59-70, DOI: 10.1007/978-1-4939-2537-7_5, 2015
  63. Yi Gao, Tammy Riklin-Raviv, Sylvain Bouix, "Shape analysis, a field in need of careful validation." Human Brain Mapping 35 (10): 4965–4978. 2014.
  64. Tammy Riklin-Raviv, Yi Gao, James Levitt, Sylvain Bouix, "Statistical shape analysis of neuroanatomical structures via level-set–based shape morphing." SIAM Journal on Imaging Sciences 7 (3): 1645–1668. 2014.
  65. Yi Gao, Sylvain Bouix, Martha Shenton, Allen Tannenbaum, "Sparse texture active contour." IEEE Transactions on Image Processing 22 (10): 3866–78. 2013.
  66. Yi Gao, Allen Tannenbaum, Hao Chen, Mylin A. Torres, Emi J. Yoshida, Xiaofeng Yang, Walter J. Curran, Tian Liu, "Automated skin segmentation in ultrasonic evaluation of skin toxicity in breast-cancer radiotherapy." Ultrasound in Medicine and Biology 39 (11): 2166–2175. 2013.
  67. Liangjia Zhu, Yi Gao, Vikram Appia, Anthony Yezzi, Chesnal Arepalli, Tracy Faber, Arthur Stillman, Allen Tannenbaum, "Automatic delineation of the myocardial wall from CT images via shape segmentation and variational region growing." IEEE Transactions on Biomedical Engineering 60 (10): 2887–2895. 2013.
  68. Liangjia Zhu, Yi Gao, Anthony Yezzi, Allen Tannenbaum, "Automatic segmentation of the left atrium from MR images via variational region growing with a moments-based shape prior." IEEE Transactions on Image Processing 22 (12): 5111–5122. 2013.
  69. Rashed Karim, R James Housden, Mayuragoban Balasubramaniam, Zhong Chen, Daniel Perry, Ayesha Uddin, Yosra Albeyatti, Ebrahim Palkhi, Prince Acheampong, Samantha Obom, Anja Hennemuth, Yingli Lu, Wenjia Bai, Wenzhe Shi, Yi Gao, Heinz O Peitgen, Perry Radau, Reza Razavi, Allen Tannenbaum, Daniel Rueckert, Josh Cates, Tobias Schaeffter, Dana C Peters, Robert S Macleod, Kawal S Rhode, "Evaluation of current algorithms for segmentation of scar tissue from late gadolinium enhancement MR images of the left atrium: an open-access grand challenge." Journal of Cardiovascular Magnetic Resonance 15 (105): 1–17. 2013.
  70. Yi Gao, Benjamin Corn, Dan Schifter, Allen Tannenbaum, "Multiscale 3D shape representation and segmentation with applications to hippocampal/caudate extraction from brain MRI." Medical Image Analysis 16 (2): 374–85. 2012.
  71. Yi Gao, Zhuo Li, Ziyin Lin, Liangjia Zhu, Allen Tannenbaum, Sylvain Bouix, C P Wong, "Automated dispersion and orientation analysis for carbon nanotube reinforced polymer composites." Nanotechnology 23 (43): 435706. 2012.
  72. Yi Gao, Yogesh Rathi, Sylvain Bouix, Allen Tannenbaum, "Filtering in the diffeomorphism group and the registration of point sets." IEEE Transactions on Image Processing 21 (10): 4383–4396. 2012.
  73. Li, Zhuo, Yi Gao, Kyoung-Sik Moon, Yagang Yao, Allen Tannenbaum, C.P. Wong, "Automatic quantification of filler dispersion in polymer composites."
  74. Liangjia Zhu, Yi Gao, Vikram Appia, Anthony Yezzi, Chesnal Arepalli, Tracy Faber, Arthur Stillman, Allen Tannenbaum, "A complete system for automatic extraction of left ventricular myocardium from CT images using shape segmentation and contour evolution." IEEE Transactions on Image Processing 23 (3): 1340–1351. 2014.
  75. Yi Gao, Ron Kikinis, Sylvain Bouix, Martha Shenton, Allen Tannenbaum, "A 3D interactive multi-object segmentation tool using local robust statistics driven active contours." Medical Image Analysis 16 (6): 1216–27. 2012.
  76. Yi Gao, Benjamin W. Corn, Dan Schifter, Allen Tannenbaum, "3D automatic segmentation of the hippocampus using wavelets with applications to radiotherapy planning." Body and Machine, Springer. 2010.
  77. Yi Gao, Romeil Sandhu, Gabor Fichtinger, Allen Tannenbaum, "A coupled global registration and segmentation framework with application to magnetic resonance prostate Imagery." IEEE Transactions on Medical Imaging 29 (10): 1781–94. 2010.

会议论文

  1. Zengan Huang, Yi Gao*, "Cost-Effective Annotation: A Novel Deep Active Learning Approach for Automated Whole Breast Ultrasound Anatomy Segmentation", oral presentation, 中国生物医学工程年会 2025
  2. Dongsheng Yi, Wanyi Sun, Hongping Song, Xiang Gu, Shangying Hu, Xuelian Zhao, Yi Gao*, Fanghui Zhao*, "AI-Assisted Automated Breast Ultrasound System vs. Handheld Ultrasound in Breast Cancer Screening: A Real-World Study Based on Community Recruitment in Shenzhen, China". St. Gallen Breast Cancer Conference 2025.
  3. Weizhen He, Haoran Zhu, Jialing Feng, Qinzhu Yang, Yanzhe Wei, Zhengji Huang, Huiren Tao, Yi Gao*, "Combing 3D body surface and CT volumetric data for ankylosing spondylitis surgery outcome simulation", IEEE International Symposium on Biomedical Imaging (IEEE ISBI) 2024
  4. Zengan Huang, Qinzhu Yang, Mu Tian, Yi Gao*, "Synthesizing with Diffusion model for improving medical image segmentation performance", IEEE International Conference on Bioinformatics and Biomedicine (IEEE BIBM) 2023
  5. Mu Tian, Qinzhu Yang, Yi Gao*, "Multi-scale Multi-task Distillation for Incremental 3D Medical Image Segmentation", Computer Vision–ECCV 2022 Workshops: Tel Aviv, Israel, October 23–27, 2022, Proceedings, Part III, pp 369-384
  6. Haofan Huang, Kaibin Huang, Han Zhou, Yan Lin, Yi Gao*, "Spatiotemporal Coding Network for the Diagnosis of Benign and Malignant Breast Lesions using Dynamic Sequence Radiomics Features", 2022中国肿瘤学大会
  7. 黄浩梵, 张赛, 李雪, 陶丽丽, 高毅*, "一个面向大规模数字前列腺病理图像计算分析平台", 中国生物医学工程大会暨创新医疗峰会 (BME2021-2022)
  8. Shuxiu Cai, Xiaxia Yu, Qiaochu Zhang, Chuan Huang, Yi Gao*, "Is hippocampus getting bumpier with age: a quantitative analysis of fine-scale dentational feature under the hippocampus on 552 healthy subjects", in SPIE Medical Imaging 2019
  9. Karl Spuhler, Yi Gao, Christine DeLorenzo, Ramin Parsey, Chuan Huang, "Synthesizing patient-specific transmission images using a multi-channel convolutional neural network framework", in Annual Meeting of the Society of Nuclear Medicine and Molecular Imaging (SNMMI) 2018
  10. Tianhao Zhao, Le Hou, Vu Nguyen, Yi Gao, Dimitris Samaras, Tahsin Kurc, Joel Saltz, "Using Machine Methods to Score Tumor-Infiltrating Lymphocytes in Lung Cancer." In USCAP. 2017.
  11. Joel Saltz, Jonas S. Almeida, Yi Gao, Ashish Sharma, Erich Bremer, Tammy DiPrima, Tahsin Kurc, Mary Saltz, J. Kalpathy-Cramer, "Towards Generation, Management, and Exploration of Combined Radiomics and Pathomics Datasets for Cancer Research." In AMIA Annual Symposium Proceedings. 2017.
  12. Naiyun Zhou, Yi Gao*, "Optimized Color Decomposition of Localized Whole Slide Images and Convolutional Neural Network for Intermediate Prostate Cancer Classification." In SPIE Medical Imaging. 2017.
  13. Naiyun Zhou, Xiaxia Yu, Tianhao Zhao, Si Wen, Fusheng Wang, Wei Zhu, Tahsin Kurc, Allen Tannenbaum, Joel Saltz, Yi Gao*, "Evaluation of Nucleus Segmentation in Digital Pathology Images through Large Scale Image Synthesis." In SPIE Medical Imaging. 2017.
  14. Erich Bremer, Tahsin Kurc, Yi Gao, Joel Saltz, Jonas S. Almeida, "Safe ‘Cloudification’ of Large Images through Picker APIs." In AMIA Annual Symposium Proceedings, 342–51. 2016.
  15. Cheng Chang, Yi Gao*, "3D Medical Image Interaction and Segmentation Using Kinect." In Proceedings of the International Symposium on Biomedical Imaging (ISBI). IEEE. 2016.
  16. Cheng Chang, Yi Gao*, "IVR: A User Steerable and Interactive Direct Volume Rendering." In MICCAI Workshop on the Interactive Medical Image Computing (IMIC). 2016.
  17. Yi Gao*, Lawrence ver Hoef, "The Bumps on the Hippocampus." In SPIE Medical Imaging.
  18. Yi Gao, Chuan Huang, "Semi-Automatic Multi-Feature Bone Segmentation in the Pelvic Region Using Dixon MRI Images Acquired in 2 Minutes: A Preliminary Result." In Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM). 2016.
  19. Yi Gao, Vadim Ratner, Liangjia Zhu, Tammy Diprima, Tahsin Kurc, Allen Tannenbaum, Joel Saltz, "Hierarchical Nucleus Segmentation in Digital Pathology Images." In SPIE Medical Imaging. 2016.
  20. Le Hou, Dimitris Samaras, Tahsin Kurc, Yi Gao, James E. Davis, Joel Saltz, "Efficient Multiple Instance Convolutional Neural Networks for Gigapixel Resolution Image Classification. Computer Vision and Pattern Recognition." In IEEE Conference on Computer Vision and Pattern Recognition (CVPR). IEEE. 2016.
  21. Le Hou, K. Singh, Dimitris Samaras, Tahsin Kurc, Yi Gao, Robert Seidman, Joel Saltz, "Automatic Histopathology Image Analysis with CNNs." In Scientific Data Summit (NYSDS), 1–6. 2016.
  22. Yi Gao*, William Liu, Shipra Arjun, Liangjia Zhu, Vadim Ratner, Tahsin Kurc, Joel Saltz, Allen Tannenbaum, "Multi-Scale Learning Based Segmentation of Glands in Digital Colonrectal Pathology Images." In SPIE Medical Imaging. 2016.
  23. Yi Gao*, Andrew Wilford, Liang Guo, ADNI, "Self-Correcting Multi-Atlas Segmentation." In SPIE Medical Imaging. 2016.
  24. Yi Gao*, Elizabeth A. Vanner, Luisa Fernanda Escobar Hoyos, Christopher Metter, Daniel Coldren, Tahsin Kurc, Kenneth R. Shroyer, Joel Saltz, "3D Quantitative Morphological Characterization of Pancreatic Carcinoma Nuclei." In Association for Pathology Informatics 2nd World Congress, Pittsburgh, PA. 2015.
  25. Yi Gao*, Allen Tannenbaum, Sylvain Bouix, "A Framework for Joint Image-and-Shape Analysis." In Proceedings of SPIE, 90340-90343. 2014.
  26. Yi Gao, Liangjia Zhu, Sylvain Bouix, Allen Tannenbaum, "Interpolation of Longitudinal Shape and Image Data via Optimal Mass Transport." In Proceedings of SPIE, 90342-90346. 2014.
  27. Yi Gao, Liangjia Zhu, Isaiah Norton, Nathalie Y. R. Agar, Allen Tannenbaum, "Reconstruction and Feature Selection for Desorption Electrospray Ionization Mass Spectroscopy Imagery." In SPIE Medical Imaging, 90360-90363. 2014.
  28. Yi Hong, Yi Gao, Marc Niethammer, Sylvain Bouix, "Depth-Based Shape-Analysis." In MICCAI, 17-25. 2014.
  29. Yi Gao, "Successive Convex Optimization for Point Set Registration." In Proceedings of the International Symposium on Biomedical Imaging (ISBI), 790-793. IEEE. 2014.
  30. Yi Gao, Sylvain Bouix, "Signed Poisson Map for Shape Analysis." In Proceedings of the International Symposium on Biomedical Imaging (ISBI), 389-393. IEEE. 2014.
  31. Yi Gao, Lawrence ver Hoef, "Hippocampal Surface Dentation Characteristics through Sub-Pixel Segmentation." In Proceedings of the International Society for Magnetic Resonance in Medicine (ISMRM), 22:126. 2014.
  32. Yi Gao, Allen X. Li, Kal Fishman, Xiaofeng Yang, Tian Liu, "Semi-Automatic Segmentation of Skin Cancer in High-Frequency Ultrasound Images: Initial Comparison with Histology." In AAPM. 2014.
  33. Liangjia Zhu, Ivan Kolesov, Yi Gao, Ron Kikinis, Allen Tannenbaum, "An Effective Interactive Medical Image Segmentation Method Using Fast GrowCut." In MICCAI Workshop on the Interactive Medical Image Computing (IMIC). 2014.
  34. Tammy Riklin Raviv, Yi Gao, James J Levitt, Sylvain Bouix, "Statistical Shape Analysis for Population Studies via Level-Set Based Shape Morphing." In ECCV, 42–51. 2012.
  35. Liangjia Zhu, Yi Gao, Anthony Yezzi, Rob MacLeod, Josh Cates, Allen Tannenbaum, "Automatic Segmentation of the Left Atrium from MRI Images Using Salient Feature and Contour Evolution." In Proceedings of 26th International Conference of the IEEE EMBS, 3211-3213, 2012. Note: oral presentation.
  36. Yi Gao*, Sylvain Bouix, "Synthesis of Realistic Subcortical Anatomy with Known Surface Deformations." In MICCAI Workshop on MPMIA, 80–88. Springer. 2012.
  37. Zhuo Li, Yi Gao, K. S. Moon, Allen Tannenbaum, C. P. Wong, "Nano Filler Dispersion in Polymer Composites for Electronic Packaging." In IEEE 62nd Electronic Components and Technology Conference (ECTC), 1752-1755. IEEE. 2012.
  38. Jan Egger, Neha Agrawal, Tyler Blevins, Nabgha Farhat, Guillaume Pernelle, Xiaojun Chen, Yi Gao, William Wells, Tobias Penzkofer, Tina Kapur, Akila Viswanathan, "Segmentation of Pelvic Structures for Gynecologic Brachytherapy". Fifth National Image Guided Therapy Workshop, Boston, MA, September 21, 2012
  39. Yi Gao, Allen Tannenbaum, "Combining Atlas and Active Contour for Automatic 3D Medical Image Segmentation." In IEEE ISBI, 1401–1404. IEEE. 2011.
  40. Yi Gao, Allen Tannenbaum, Hao Chen, Mylin Torres, Tian Liu, "Skin Segmentation Algorithm for Breast Ultrasound Images Using Active Contour Method: Toward Development of Ultrasound-Based Automated-Tissue-Toxicity-Assessment (ATTA) Tool in Breast-Cancer Radiotherapy." In Medical Physics, Issue for the American Association of Physicists in Medicine(AAPM), 38:3698-3701. 2011.
  41. Liangjia Zhu, Yi Gao, Vandana Mohan, Arthur Stillman, Tracy Faber, Allen Tannenbaum, "Estimation of Myocardial Volume at Risk from CT Angiography." In Proceedings of SPIE, 7963:79632-79637. 2011.
  42. Yi Gao, Behnood Gholami, R. MacLeod, J. Blauer, W. Haddad, Allen Tannenbaum, "Segmentation of the Epicardial Wall of the Left Atrium Using Statistical Shape Learning and Local Curve Statistics." In Proceedings of SPIE, 7623:76234-76241. 2010.
  43. Yi Gao, John Melonakos, Allen Tannenbaum, "Fast Hamilton-Jacobi Equation Solver and Neural Fiber Bundle Extraction." In Proceedings of SPIE, 7623:76231-76240, 2010. Note: oral presentation.
  44. Yi Gao, Allen Tannenbaum, "`Active Contour without Edges’, on Parametric Manifolds." In SPIE Medical Imaging, 7623:76233-76240. 2010.
  45. Yi Gao, Allen Tannenbaum, "Image Processing and Registration in a Point Set Representation." In Proceedings of SPIE, 7623:762308-762316, Note: oral presentation. 2010.
  46. Yi Gao, Allen Tannenbaum, "Shape Based MRI Prostate Image Segmentation Using Local Information Driven Directional Distance Bayesian Method." In Proceedings of SPIE, 7623:762315-762322, 2010. Note: oral presentation.
  47. Yi Gao, Allen Tannenbaum, Ron Kikinis, "Simultaneous Multi-Object Segmentation Using Local Robust Statistics and Contour Interaction." In MICCAI Workshop on Medical Computer Vision, 195-203. 2010.
  48. Yi Gao, Delphine Nain, Xavier LeFaucheur, Allen Tannenbaum, "Spherical Wavelet ITK Filter." In MICCAI Workshop on Open Source, Brisbane, Australia/Insight Journal. www.insight-journal.org/browse/publication/155. 2007.
  49. John Melonakos, Yi Gao, Allen Tannenbaum, "Tissue Tracking: Applications for Brain MRI Classification." In SPIE Medical Imaging. 2007.
  50. Yi Gao, John Melonakos, Allen Tannenbaum, "Conformal Flattening ITK Filter." In MICCAI Workshop on Open Source, Copenhagen, Denmark/Insight Journal. www.insight-journal.org/browse/publication/112. 2006.
  51. Yi Gao, Shangkai Gao, Chuxiong Ding, L. Rao, Dirar S. Khoury, "Semi-Automatic Segmentation of the Endocardial Boundary in Intracardiac Echocardiographic Images." In Proceedings of 26th International Conference of the IEEE EMBS, 1911-1914, 2004. Note: oral presentation.

摘要及其他

  1. Y. Gao, N. Farhat, N. Agrawal, G. Pernelle, X. Chen, J. Egger, S. Blevins, S. Bouix, A. Tannenbaum, W. Wells, R. Kikinis, E. Schmidt, A. Viswanathan, and T. Kapur, Needle extraction for the intraoperative MR image guided brachytherapy, 5th Image Guided Therapy Workshop, 2012.
  2. J. Egger, N. Agrawal, S. Blevins, N. Farhat, G. Pernelle, X. Chen, Y. Gao, , T. Penzkofer, T. Kapur, and A. Viswanathan, Segmentation of pelvic structures for gynecologic brachytherapy, 5th Image Guided Therapy Workshop, 2012.
  3. T. Riklin-Raviv, Y. Gao, and S. Bouix, Statistical shape analysis with modified Hausdorff distance, in IEEE EMBS, 2012.
  4. R. Sandhu, A. Dominitz, Y. Gao, and A. Tannenbaum, Volumetric mapping of genus zero objects via mass preservation, arxiv.org/abs/1205.1225, 2012.
  5. J. Melonakos, Y. Gao, and A. Tannenbaum, Conformal flattening of brain ventricles, in Poster presented at Memphis BioImaging Symposium 2006, 2006.